Changes between Version 3 and Version 4 of DataManagement/SftpServer


Ignore:
Timestamp:
Aug 17, 2011 11:39:52 PM (13 years ago)
Author:
laurent
Comment:

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  • DataManagement/SftpServer

    v3 v4  
    1212
    1313 * batchX/
    14    * A set of compressed files containing the plain text data and md5 files for downloading purpose. These are named as follows: timestamp.BGI.batchX.data_type.hg1X.data_format.tar.bz2. All plain text data should be available as a compressed file, including but not limited to: CNV, InDel, InDel annotations, SNP, SNP annotation. Some of these are available in multiple formats; see BGI data page for more explanation about the BGI data and its formats. ** md5 checksum files for all files.
     14   * A set of compressed files containing the plain text data and md5 files for downloading purpose. These are named as follows: timestamp.BGI.batchX.data_type.hg1X.data_format.tar.bz2. All plain text data should be available as a compressed file, including but not limited to: CNV, !InDel, !InDel annotations, SNP, SNP annotation. Some of these are available in multiple formats; see BGI data page for more explanation about the BGI data and its formats. ** md5 checksum files for all files.
    1515
    1616 * batchX/bam OR batchX/alignment
     
    4545 * Unless specified otherwise, all data is aligned on hg19
    4646 * Some of the folder/filenames are inconsistent from one batch to the other. This is because the original names as found on the BGI HD have been kept.
    47 
    4847=== /target/gpfs2/gcc/groups/gonl/sftp/pilot ===
    4948Data fro the pilot, including aligned BAMs and SNPs.