| 1 | = Minutes of SV skype call on October 13rd = |
| 2 | |
| 3 | == Participants == |
| 4 | Victor, Lennart, Najaf, Aby, Leon, Laurent, Abdel |
| 5 | |
| 6 | == Minutes == |
| 7 | |
| 8 | Pilot phase SV detection run |
| 9 | * BreakSeq: Slavik is working on the reference set using hg19 since the tool only supports hg18 now. |
| 10 | * BreakDancer: Jayne/Joep made some parameter changes on the pipeline installed at Groningen cluster. Will make new SV calls for the pilot dataset. |
| 11 | * Dindel: Laurent finished the SV call and is working now on the filtering part. Aim to deliver the result next week. |
| 12 | * GenomeStrip: Bob is continuing on the filtering part. Aim to deliver the result next week. |
| 13 | |
| 14 | Pilot phase validation |
| 15 | |
| 16 | |
| 17 | Full GoNL dataset |