wiki:2011_10_13_SV_group_meeting

Version 1 (modified by Leon Mei, 11 years ago) (diff)

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Minutes of SV skype call on October 13rd

Participants

Victor, Lennart, Najaf, Aby, Leon, Laurent, Abdel

Minutes

Pilot phase SV detection run

  • BreakSeq?: Slavik is working on the reference set using hg19 since the tool only supports hg18 now.
  • BreakDancer?: Jayne/Joep? made some parameter changes on the pipeline installed at Groningen cluster. Will make new SV calls for the pilot dataset.
  • Dindel: Laurent finished the SV call and is working now on the filtering part. Aim to deliver the result next week.
  • GenomeStrip?: Bob is continuing on the filtering part. Aim to deliver the result next week.

Pilot phase validation

Full GoNL dataset

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