Changes between Version 21 and Version 22 of SnpCallingPipeline


Ignore:
Timestamp:
Oct 16, 2010 6:01:32 PM (14 years ago)
Author:
Morris Swertz
Comment:

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  • SnpCallingPipeline

    v21 v22  
    4545                color=lightgrey;
    4646                node [style=filled,color=white];
    47                 "flowcell_lane.aligned.bam" -> RealignIndelsAndFixMates2
    48                 "flowcell_lane2.aligned.bam" -> RealignIndelsAndFixMates2
    49                 "flowcell_lane3.aligned.bam" -> RealignIndelsAndFixMates2
     47                "flowcell_lane.aligned.bam" -> Merge -> "sample.aligned.bam" -> RealignIndelsAndFixMates2
     48                "flowcell_lane.aligned.bam" -> Merge
     49                "flowcell_lane.aligned.bam" -> Merge
    5050                RealignIndelsAndFixMates2 -> IndelGenotyperV2 -> FilterSingleCalls -> UnifiedGenotyper -> Filtration -> VariantEval -> "QC reports"
    5151Filtration -> VCF