Changes between Version 1 and Version 2 of SchematicOverview

Timestamp:

Sep 13, 2010 12:26:39 AM (14 years ago)

Author:

Morris Swertz

Comment:

--

SchematicOverview

@@ -1 +1 @@
 = Schematic overview of BBMRI/GvNL pipelines =
+
+Input: 
+ * Raw read data from BGI 12x (FASTQ)
+ * Called variants from BGI (VCF) 
+ * Immunochip data
+
 
 {{{
@@ -7 +13 @@
 FASTQ->"de novo variant discovery and verification"
 BGI->VCF->"Chip QC"->"Qced Genotypes"
+ImmunoChip->"Chip QC"
 VCF->"Mendelian QC"->"Qced Genotypes"
 "Qced Genotypes"->"Call improvement and phasing"->"Improved and phased genotypes"->Imputations
@@ -15 +22 @@
 }
 }}}
+}}}