Changes between Initial Version and Version 1 of SchematicOverview

Timestamp:

Sep 13, 2010 12:24:12 AM (14 years ago)

Author:

Morris Swertz

Comment:

--

SchematicOverview

@@ +1 @@
+= Schematic overview of BBMRI/GvNL pipelines =
+
+{{{
+#!graphviz
+digraph G {
+BGI->FASTQ->"SNP and indel calling"->VCF
+FASTQ->"de novo variant discovery and verification"
+BGI->VCF->"Chip QC"->"Qced Genotypes"
+VCF->"Mendelian QC"->"Qced Genotypes"
+"Qced Genotypes"->"Call improvement and phasing"->"Improved and phased genotypes"->Imputations
+"Improved and phased genotypes"->"Population genetics"
+"Improved and phased genotypes"->"Functional variants"
+"Improved and phased genotypes"->"Novel variant discovery and verification"
+FASTQ->"Novel variant discovery and verification"
+}
+}}}