Changes between Version 52 and Version 53 of BigCompute

Timestamp:

Jan 14, 2011 2:14:59 PM (13 years ago)

Author:

Barbera van Schaik

Comment:

--

BigCompute

@@ -36 +36 @@
 * !GatkGenerateIntervalFile (''done'') - see e-mail Freerk on Dec 13, 2010
 * !ReAlign (''done'') - pe06-realign.ftl
+* !FixMates (''in progress'') - pe07-fixmates.ftl
 
 '''To be implemented'''
@@ -144 +145 @@
   * To do: implement recalibration step, and a check on all bam files of the split input before the merge step
 
-'''Gvnl pipeline on all samples (with the correct labels this time). Date: 23-12-2010'''
-|| '''WF''' || '''Lane''' || '''Lane''' || '''Library''' || '''Start''' || '''Elapsed time (s)''' || '''Progress''' ||
-|| 1 || A4a || L4 || HUModqRBTDIBAPE || 10:43:59pm ||  || [https://hangplek.nikhef.nl/workflows//workflow-sJmkgb/html/workflow-sJmkgb.html running] ||
-|| 2 || A4a || L6 || HUModqRBTDIAAPE || 10:45:59pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-aAsDeR/html/workflow-aAsDeR.html running] ||
-|| 3 || A4a || L7 || HUModqRBTDIBAPE || 10:46:58pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-kJqFEE/html/workflow-kJqFEE.html running] ||
-|| 4 || A4b || L3 || HUModqRBUDIBAPE || 10:48:58pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-31tj5M/html/workflow-31tj5M.html running] ||
-|| 5 || A4b || L6 || HUModqRBUDIAAPE || 10:50:20pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-suEsIa/html/workflow-suEsIa.html running] ||
-|| 6 || A4b || L6 || HUModqRBUDIBAPE || 10:51:33pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-DLDFJr/html/workflow-DLDFJr.html running] ||
-|| 7 || A4c || L7 || HUModqRBVDIAAPE || 10:52:56pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-wveG2f/html/workflow-wveG2f.html running] ||
-|| 8 || A4c || L7 || HUModqRBVDIBAPE || 10:57:42pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-TIloLk/html/workflow-TIloLk.html running] ||
-|| 9 || A4c || L7 || HUModqRBVDIBAPE || 10:58:46pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-bhVRE6/html/workflow-bhVRE6.html running] ||
-|| 10 || R2A || L1 || HUModqRAFDIBAPE || 10:59:55pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-JZeH6v/html/workflow-JZeH6v.html running] ||
-|| 11 || R2A || L1 || HUModqRAFDIBAPE || 11:01:14pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-IEYRBS/html/workflow-IEYRBS.html running] ||
-|| 12 || R2B || L6 || HUModqRAEDIAAPE || 11:02:24pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-Btm3vt/html/workflow-Btm3vt.html running] ||
-|| 13 || R2C || L2 || HUModqRADDIBAPE || 11:03:28pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-pEZM6s/html/workflow-pEZM6s.html running] ||
-|| 14 || R2C || L7 || HUModqRADDIAAPE || 11:04:33pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-wkA6gd/html/workflow-wkA6gd.html running] ||
-|| 15 || Unknown || L6 || HUModqRBUDIAAPE || 11:06:03pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-pe07yu/html/workflow-pe07yu.html running] ||
-|| 16 || vartest.xml ||  ||  || 11:07:16pm ||  || [https://hangplek.nikhef.nl:443/workflows/workflow-Jkd0HU/html/workflow-Jkd0HU.html running] ||
-
-
 == Alternatives ==