Changes between Version 46 and Version 47 of BigCompute


Ignore:
Timestamp:
Dec 23, 2010 12:42:07 PM (11 years ago)
Author:
Barbera van Schaik
Comment:

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  • BigCompute

    v46 v47  
    127127* 20-12-2010 17:48 [https://hangplek.nikhef.nl:443/workflows/workflow-ICmgZF/html/workflow-ICmgZF.html done] - elapsed time 9165 s
    128128
    129 
    130129'''Gvnl pipeline on remaining samples (split, bwa, merge, coverage-per-base, picard-qc, mark-duplicates, re-align) Start: 20-12-2010 18:50'''
    131130|| '''Lane''' || '''Progress''' || '''Elapsed time''' ||
     
    139138* Note1: Workflow stops after merge-bam. Working on it.
    140139* Note2: The Dutch grid seems very busy at the moment. That could explain the longer execution times.
     140
     141*Gvnl pipeline on theoretical reads*
     142  * 22-12-2010 19:14 [https://hangplek.nikhef.nl/workflows//workflow-FRErry/html/workflow-FRErry.html done] - elapsed time 38587 s
     143  * Workflow does continue after the merge-bam now
     144  * To do: implement recalibration step, and a check on all bam files of the split input before the merge step
    141145
    142146== Alternatives ==