| Version 8 (modified by , 13 years ago) (diff) |
|---|
BGI datasets
TODO: More info on statistic and how to access the dataset will be added here.
- Pilot phase: 60 samples, 180 lanes. 183 lanes in total due to rerun.
- 2st batch: 90 samples, 295 lanes.
- 3rd batch: 222 samples, 683 lanes, 10TB
BGI will shared with us: SNP calling results (VCF), SOAP format for indels.
Data location
| Batch | Samples | Lanes | Size | Groningen storage | Grid storage (VO) | Storage additional sites | Analysis site | Status |
| 1st batch aka Pilot phase | 60 | 183 | yes | yes (vlemed) | UMGC, AMC (for comparison) | aligned, in progress | ||
| 2st batch | 90 | 295 | yes | yes (vlemed) | AMC | in progress | ||
| 3rd batch | 222 | 683 | 10TB | yes | no | UMGC | in progress | |
| 4th batch | 235 | 630 | 10TB | yes | yes (bbmri.nl) | Hubrecht, EMC | LUMC/TUdelft, UMGC, Hubrecht, EMC | in progress |
| 5th batch | 153 | no | no | not on storage yet | ||||
| 6th batch | 10 | no | not arrived yet |
